Both the charging system fuse and the electrical system fuses are in play when the machine is running and mowing. The key switch, ammeter, PTO switch are electrically between the fuses when the machine is operating.
Your clutch is the high amperage draw item followed by an electric fuel pump if your machine had DFI or EFI, or a fuel shutoff solenoid if carbureted.
Check the continuity of the electric clutch coil, should not be less than 2.2 OHMs and infinity to ground from either leg of the clutch wire connectors. This should be performed with an ohmmeter that is automatically zeroed or able to be zeroed when the leads are connected to each other. Internal resistance of the clutch coil should be done with a cold clutch. The clutch electrical connector must be disconnected to do this testing.
Initially check the voltage across the battery with the engine running at full throttle and having been run long enough to stabilize the charging system. This voltage should be 13.9-14.3 VDC and check the ammeter on the machine to see what the charging rate is, should be at zero to a slightly positive charge rate if the battery is fully capable and charged.
The voltages on my machine are 14.2 VDC at full throttle and 13.8 VDC when the deck is operating. My machine doesn't have an ammeter, but I do have an aftermarket voltage indication system installed.
Mad Mackie in CT