definitely lacks information as far as charge pump orientation. Just says to make the pump cover and the pump housing prior to disassembly so you get them reinstalled in the correct direction. Would be nice if they had a graph for the pump units. There is one for the integrated units for which way the cover goes.
Some information on hydrostat systems. The charge pump which is under the football cover pumps oil into the piston pump. That piston pump then pumps that oil to the wheel motor. The oil from the wheel motor gets returned to the piston pump and is then pumped back to the wheel motor. So Think of the hydro to wheel motor as a closed loop system which for the most part is. Now some oil gets lost in the piston pumping phase which flows into the pump housing and is returned to the oil tank. As the oil is lost from the piston pump the charge pump gets oil from the oil tank through the filter to replace what oil the piston pump is loosing. So if the system is lets say 90% efficient then 90% of the oil loops between the piston pump and the wheel motor and is unfiltered, and 10% gets lost and returned to the tank to be filtered.
So in the case of your hydro pumps the charge pump and top plate have the same oil flow pattern for both pumps, but your control lever on the outside of the pumps that controls direction work in opposite directions. Your right hydro when the stick is moved forward tips the piston pump swath plate down in the front, but the left lever moves the swath plate up in the front. Which in turn causes the oil to flow in opposite directions coming out of the pump units.