The R/H wheel motor has a problem if it turned with difficulty when you flushed it.
There is no doubt in my mind that the entire hydraulic system is contaminated. With a common reservoir supplying both pumps and a common return back to the reservoir from both pumps there is no way of preventing cross contamination. I think that the return filters have bypass valves and when the filtering element gets plugged enough then it goes into bypass which passes unfiltered oil back to the reservoir.
As an aircraft mech I have replaced engines that had only a scavenge oil pump failure and the oil supply tank, oil cooler, thermostat valve assembly, oil shutoff valve, and all hoses had to be replaced just as if the engine had a major internal failure. The scavenge oil pump is used in a dry sump type engine to pump expended engine oil thru the oil cooler and back to the oil supply tank.
Mad Mackie in CT