From the top
1) you can not test magneto coils with a standard Ohm meter because what you will be reading is the Hall effect chip which times he spark
Cheap multimeters can actually pass enough voltage down the wire to fry the chip
2) were they genuine Kohler coils, quality parts from an on line retailer or shop front or a lucky dip coil off Evilpay or Ammozone ?
How are you testing the spark ?
The magneto is self energizing so if there is no kill wire on it and it is not touching the magnets ( or any other part of the flywheel then it must make a spark if it is good .