Sorry not to add an update in so long-
Unfortunately I never really figured this issue out. However I've narrowed it down to something with the air intake/fuel supply.
If I run the mower on about half power it seems to be less of an issue (cub cadet salesman said to run at full throttle but the 25 hp engine cuts fine at half throttle)
Also to really make this weird- I noticed that if I spray the air filter with carb cleaner the thing runs great. I'm embarrassed to admit that I keep a can of carb cleaner on my tractor and quick spray the filter if it starts acting up. (i know it's not safe, and i know it's a "duct tape" fix- that's why i'm embarrassed)
I'm going to pick up a new air filter tomorrow and see what difference that makes. I did notice my mower is missing the oil soaked pre-filter that is in the book for this model- I'm wondering if too much air flow has caused this issue and soaking the filter somehow helps, but this doesn't really add up to me. I'll post more when i know if i don't set myself on fire while mowing.